Upgrade macos

macx64/mpi/mpich/share/man/man1/hydra_nameserver.1

@@ -1,10 +1,19 @@
-.TH hydra_nameserver 1 "6/5/2019" " " "HYDRA"
+.TH hydra_nameserver 1 "2/3/2025" " " "HYDRA"
 .SH NAME
-hydra_nameserver \-  Internal executable used by Hydra 
+hydra_nameserver \-  program to support MPI
+.I s name publishing features with hydra 
 .SH DESCRIPTION
-This executable is designed to not be run directly by users, but to
-support the Hydra process manager. As such, no documentation will be
-provided here.
+Hydra is the default name service for MPI\\
+s name publishing features
+(MPI_PUBLISH_NAME/MPI_LOOKUP_NAME). For programs launched by separate
+hydra instances, a separate nameserver mechanism need be launched in
+order for the name publishing to work across multiple process managers.
+
+This can be achieved with hydra_nameserver. For example:
+.nf
+shell@myhost1$ hydra_nameserver &
+shell@myhost1$ mpiexec -hosts myhost1,myhost2 -n 4 -nameserver myhost1 ./a.out
+.fi
 
 .SH LOCATION
-/tmp/kS7n0Mi0xa/mpich-3.3.1/src/pm/hydra/tools/nameserver/hydra_nameserver.txt
+/var/tmp/qbvJ6gPnF7/mpich-4.3.0/src/pm/hydra/mansrc/hydra_nameserver.txt

macx64/mpi/mpich/share/man/man1/hydra_persist.1

@@ -1,4 +1,4 @@
-.TH hydra_persist 1 "6/5/2019" " " "HYDRA"
+.TH hydra_persist 1 "2/3/2025" " " "HYDRA"
 .SH NAME
 hydra_persist \-  Internal executable used by Hydra 
 .SH DESCRIPTION
@@ -7,4 +7,4 @@ support the Hydra process manager. As such, no documentation will be
 provided here.
 
 .SH LOCATION
-/tmp/kS7n0Mi0xa/mpich-3.3.1/src/pm/hydra/tools/bootstrap/persist/hydra_persist.txt
+/var/tmp/qbvJ6gPnF7/mpich-4.3.0/src/pm/hydra/mansrc/hydra_persist.txt

macx64/mpi/mpich/share/man/man1/hydra_pmi_proxy.1

@@ -1,10 +1,10 @@
-.TH hydra_pmi_proxy 1 "6/5/2019" " " "HYDRA"
+.TH hydra_pmi_proxy 1 "2/3/2025" " " "HYDRA"
 .SH NAME
-hydra_pmi_proxy \-  Internal exectuable used by Hydra 
+hydra_pmi_proxy \-  Internal executable used by Hydra 
 .SH DESCRIPTION
 This executable is designed to not be run directly by users, but to
 support the Hydra process manager. As such, no documentation will be
 provided here.
 
 .SH LOCATION
-/tmp/kS7n0Mi0xa/mpich-3.3.1/src/pm/hydra/pm/pmiserv/hydra_pmi_proxy.txt
+/var/tmp/qbvJ6gPnF7/mpich-4.3.0/src/pm/hydra/mansrc/hydra_pmi_proxy.txt

macx64/mpi/mpich/share/man/man1/mpicc.1

@@ -1,4 +1,4 @@
-.TH mpicc 1 "6/5/2019" " " "MPI"
+.TH mpicc 1 "2/3/2025" " " "MPI"
 .SH NAME
 mpicc \-  Compiles and links MPI programs written in C 
 .SH DESCRIPTION
@@ -73,6 +73,11 @@ for all of the other dependencies.
 .PD 1
 .PD 0
 .TP
+.B -mpi
+- abi  - Compile and link using the standard MPI ABI.
+.PD 1
+.PD 0
+.TP
 .B others     
 - are passed to the compiler or linker.  For example, 
 .I \\-c
@@ -117,7 +122,7 @@ lengths for basic data objects (such as
 .I long double
 ) and that
 uses compatible run-time libraries.  On many systems, the various
-compilers are compatible and may be used interchangably.  There are
+compilers are compatible and may be used interchangeably.  There are
 exceptions; if you use the 
 .I MPICH_CC
 environment variable or the

macx64/mpi/mpich/share/man/man1/mpicxx.1

@@ -1,4 +1,4 @@
-.TH mpicxx 1 "6/5/2019" " " "MPI"
+.TH mpicxx 1 "2/3/2025" " " "MPI"
 .SH NAME
 mpicxx \-  Compiles and links MPI programs written in C++ 
 .SH DESCRIPTION
@@ -73,6 +73,11 @@ for all of the other dependencies.
 .PD 1
 .PD 0
 .TP
+.B -mpi
+- abi  - Compile and link using the standard MPI ABI.
+.PD 1
+.PD 0
+.TP
 .B others     
 - are passed to the compiler or linker.  For example, 
 .I \\-c
@@ -117,7 +122,7 @@ lengths for basic data objects (such as
 .I long double
 ) and that
 uses compatible run-time libraries.  On many systems, the various
-compilers are compatible and may be used interchangably.  There are
+compilers are compatible and may be used interchangeably.  There are
 exceptions; if you use the 
 .I MPICH_CXX
 environment variable or the

macx64/mpi/mpich/share/man/man1/mpiexec.1

@@ -1,4 +1,4 @@
-.TH mpiexec 1 "6/5/2019" " " "MPI"
+.TH mpiexec 1 "2/3/2025" " " "HYDRA"
 .SH NAME
 mpiexec \-  Run an MPI program 
 .SH SYNOPSIS
@@ -27,7 +27,7 @@ mpiexec -n 4 a.out
 .fi
 
 
-The MPI standard specifies the following arguments and their meanings:
+The MPI standard suggests the following arguments and their meanings:
 
 .PD 0
 .TP
@@ -41,11 +41,6 @@ The MPI standard specifies the following arguments and their meanings:
 .PD 1
 .PD 0
 .TP
-.B -arch <architecture name> 
-- Pick hosts with this architecture type
-.PD 1
-.PD 0
-.TP
 .B -wdir <working directory> 
 - cd to this one 
 .B before
@@ -53,6 +48,23 @@ running executable
 .PD 1
 .PD 0
 .TP
+.B -configfile <name> 
+- file containing specifications of host/program,
+one per line, with # as a comment indicator, e.g., the usual
+mpiexec input. The lines excluding comments are concatenated with newlines
+replaced with spaces, and are then parsed as command line options.
+.PD 1
+
+The following options are reserved by the MPI standard, but they are not
+supported by MPICH (hydra):
+
+.PD 0
+.TP
+.B -arch <architecture name> 
+- Pick hosts with this architecture type
+.PD 1
+.PD 0
+.TP
 .B -path <pathlist> 
 - use this to find the executable
 .PD 1
@@ -67,30 +79,10 @@ of processes (see the MPI-2 specification for more details)
 .B -file <name> 
 - implementation-defined specification file
 .PD 1
-.PD 0
-.TP
-.B -configfile <name> 
-- file containing specifications of host/program,
-one per line, with # as a comment indicator, e.g., the usual
-mpiexec input, but with ":" replaced with a newline.  That is,
-the configfile contains lines with -soft, -n etc.
-.PD 1
 
 Additional arguments that are specific to the MPICH implementation
 are discussed below.
 
-Note that not all of these parameters are meaningful for all
-systems.  For example, the 
-.I gforker
-version of 
-.I mpiexec
-creates all
-processes on the same system on which it is running; in that case, the
-.I \\-arch
-and 
-.I \\-host
-options are ignored.
-
 The colon character (
 .I :
 ) may be used to separate different executables
@@ -109,6 +101,15 @@ mpiexec -n 4 ocean : -n 8 air
 
 .SH MPICH-SPECIFIC ARGUMENTS
 
+MPICH implements a few process managers. Here we list a general set of
+arguments that many of the implementations support. More detailed options
+that are supported by a particular implementation, e.g. hydra, are
+available via:
+.nf
+mpiexec -h
+.fi
+
+
 Many of the implementations of process managers in MPICH support the
 following arguments to 
 .I mpiexec
@@ -168,7 +169,7 @@ corresponding
 .I \\-env
 version, except they apply to all executables, not just
 the current executable (in the case that the colon syntax is used to specify
-multiple execuables).
+multiple executables).
 .PD 1
 .PD 0
 .TP
@@ -266,50 +267,6 @@ is used if
 .I MPIEXEC_PORT_RANGE
 is not set.
 .PD 1
-.PD 0
-.TP
-.B MPIEXEC_PREFIX_DEFAULT 
-- If this environment variable is set, output
-to standard output is prefixed by the rank in 
-.I MPI_COMM_WORLD
-of the 
-process and output to standard error is prefixed by the rank and the 
-text 
-.I (err)
-; both are followed by an angle bracket (
-.I >
-).  If
-this variable is not set, there is no prefix.
-.PD 1
-.PD 0
-.TP
-.B MPIEXEC_PREFIX_STDOUT 
-- Set the prefix used for lines sent to standard
-output.  A 
-.I %d
-is replaced with the rank in 
-.I MPI_COMM_WORLD
-; a 
-.I %w
-is 
-replaced with an indication of which 
-.I MPI_COMM_WORLD
-in MPI jobs that
-involve multiple 
-.I MPI_COMM_WORLD
-s (e.g., ones that use 
-.I MPI_Comm_spawn
-or
-.I MPI_Comm_connect
-).
-.PD 1
-.PD 0
-.TP
-.B MPIEXEC_PREFIX_STDERR 
-- Like 
-.I MPIEXEC_PREFIX_STDOUT
-, but for standard error.
-.PD 1
 
 .SH RETURN STATUS
 .I mpiexec
@@ -319,3 +276,5 @@ processes created by
 \&.
 
 
+.SH LOCATION
+/var/tmp/qbvJ6gPnF7/mpich-4.3.0/src/pm/hydra/mansrc/mpiexec.txt

macx64/mpi/mpich/share/man/man1/mpif77.1

@@ -1,203 +0,0 @@
-.TH mpif77 1 "6/5/2019" " " "MPI"
-.SH NAME
-mpif77 \-  Compiles and links MPI programs written in Fortran 77 
-.SH DESCRIPTION
-This command can be used to compile and link MPI programs written in
-Fortran.  It provides the options and any special libraries that are
-needed to compile and link MPI programs.
-
-It is important to use this command, particularly when linking programs,
-as it provides the necessary libraries.
-
-.SH COMMAND LINE ARGUMENTS
-.PD 0
-.TP
-.B -show      
-- Show the commands that would be used without
-running them
-.PD 1
-.PD 0
-.TP
-.B -help      
-- Give short help
-.PD 1
-.PD 0
-.TP
-.B -f77=name   
-- Use compiler 
-.I name
-instead of the default choice.  Use
-this only if the compiler is compatible with the MPICH
-library (see below)
-.PD 1
-.PD 0
-.TP
-.B -config=name 
-- Load a configuration file for a particular compiler.
-This allows a single 
-.I mpif77
-command to be used with 
-multiple compilers.
-.PD 1
-.PD 0
-.TP
-.B -compile_info 
-- Show the steps for compiling a program.  This option
-can be used to see what options and include paths are
-used by mpif77.
-.PD 1
-.PD 0
-.TP
-.B -link_info 
-- Show the steps for linking a program.  This option
-can be used to see what options and libraries are used by
-mpif77.
-.PD 1
-.PD 0
-.TP
-.B -profile=name 
-- Use the MPI profiling given by name.  See below for
-details
-.PD 1
-.PD 0
-.TP
-.B -echo      
-- Show exactly what this program is doing.
-This option should normally not be used.
-.PD 1
-.PD 0
-.TP
-.B -static
-- mpi - Use a statically compile MPI library, but shared libraries
-for all of the other dependencies.
-.PD 1
-.PD 0
-.TP
-.B others     
-- are passed to the compiler or linker.  For example, 
-.I \\-c
-causes files to be compiled, 
-.I \\-g
-selects compilation with
-debugging on most systems, and 
-.I \\-o name
-causes linking
-with the output executable given the name 
-.I name
-\&.
-
-.PD 1
-
-.SH ENVIRONMENT VARIABLES
-The environment variables 
-.I MPICH_F77
-may be used
-to select different Fortran compiler and linker.  Note that since
-MPICH is built with a particular C and Fortran compiler, change the
-compilers used can cause problems.  Use this only if you could intermix
-code compiled with the different compilers.
-
-.SH COMPATIBLE COMPILERS
-The MPI library may be used with any compiler that uses the same
-lengths for basic data objects (such as 
-.I long double
-) and that
-uses compatible run-time libraries.  On many systems, the various
-compilers are compatible and may be used interchangably.  There are
-exceptions; if you use the 
-.I MPICH_F77
-environment variable or the
-.I \\-f77=name
-command-line argument to override the choice of compiler
-and encounter problems, try reconfiguring MPICH with the new compiler
-and installing MPICH in a separate location.  See the installation manual
-for more details.
-
-.SH EXAMPLES
-To compile a single file 
-.I foo.f
-, use
-.nf
-mpif77 -c foo.f
-.fi
-
-
-To link the output and make an executable, use
-.nf
-mpif77 -o foo foo.o
-.fi
-
-Combining compilation and linking in a single command
-.nf
-mpif77 -o foo foo.f
-.fi
-
-is a convenient way to build simple programs.
-
-.SH SELECTING A PROFILING LIBRARY
-The 
-.I \\-profile=name
-argument allows you to specify an MPI profiling
-library to be used.  
-.I name
-can have two forms:
-
-.br
-A library in the same directory as the MPI library
-.br
-The name of a profile configuration file
-.br
-
-If 
-.I name
-is a library, then this library is included before the MPI
-library.  This allows the simple use of libraries that make use of the
-MPI profiling interface and that are installed in the same directory as
-the MPI library.
-
-If 
-.I name.conf
-is the name of a file in the sysconfdir directory, then this
-is read and may define the following variables:
-.PD 0
-.TP
-.B PROFILE_PRELIB 
-- Libraries (and paths) to include before the MPI library
-.PD 1
-.PD 0
-.TP
-.B PROFILE_POSTLIB 
-- Libraries to include after the MPI library
-.PD 1
-.PD 0
-.TP
-.B PROFILE_INCPATHS 
-- C preprocessor arguments for any include files
-For example, to add 
-.I /usr/local/myprof/include
-to the include path and
-the library 
-.I libmyprof.a
-in 
-.I /usr/local/myprof/lib
-to the link step, 
-you could create the file 
-.I myprof.conf
-with the lines
-.PD 1
-
-.nf
-PROFILE_PRELIB="-L/usr/local/myprof/lib -lmyprof"
-PROFILE_INCPATHS="-I/usr/local/myprof/include"
-.fi
-
-and place it in the sysconfdir directory (this directory is set at
-configure time when MPICH is built).  Then using the command-line
-argument 
-.I \\-profile=myprof
-will cause these
-definitions to be added to the relevant compile commands.
-
-.SH SEE ALSO
-mpicc, mpicxx, mpifort, mpiexec
-.br

macx64/mpi/mpich/share/man/man1/mpifort.1

@@ -1,4 +1,4 @@
-.TH mpifort 1 "6/5/2019" " " "MPI"
+.TH mpifort 1 "2/3/2025" " " "MPI"
 .SH NAME
 mpifort \-  Compiles and links MPI programs written in Fortran 90 
 .SH DESCRIPTION
@@ -103,7 +103,7 @@ lengths for basic data objects (such as
 .I long double
 ) and that
 uses compatible run-time libraries.  On many systems, the various
-compilers are compatible and may be used interchangably.  There are
+compilers are compatible and may be used interchangeably.  There are
 exceptions; if you use the 
 .I MPICH_FC
 environment variable or the